Topics tagged rescript

Topic	Replies	Views	Activity
Memory error creating classifier using RESCRIPt and Silva 138 Technical Support feature-classifier , rescript	8	1113	September 24, 2021
Modifying taxonomic annotation from RESCRIPt Community Plugin Support taxonomy , rescript	3	958	April 8, 2022
subprocess error while installing RESCRIPt Community Plugin Support rescript	7	662	April 23, 2022
Trim alignment produces shorter reads than fragment extraction Community Plugin Support feature-classifier , rescript	2	539	March 21, 2022
silva138_V3v4/V4V5_human-stool_classifier.qza Community Plugin Support rescript	6	1038	April 1, 2022
Building full-length rRNA database using RESCRIPt Community Plugin Support rescript	3	883	February 14, 2022
Reference db compatibility SILVA 138 - 138.1 Community Plugin Support clawback , rescript	14	1179	February 25, 2022
qiime rescript dereplicate --p-mode super leads to "Taxonomic label depth is uneven" error with qiime rescript evaluate-fit-classifier Community Plugin Support rescript	4	816	February 6, 2022
How to deal with '-' in reference sequences to create a custom database by Rescript User Support rescript	3	246	January 17, 2022
RESCRIPt - missing sequences or mis-formatted taxonomies? Community Plugin Support taxonomy , rescript	11	985	October 21, 2021
Host DNA or incorrect classifer workflow leading to high percentages just domain level classification Community Plugin Support dada2 , rescript	6	1001	November 12, 2021
taxonomy assignment problem Community Plugin Support rescript	10	1444	November 11, 2021
Rescript 'KeyError' Community Plugin Support dereplicate , rescript	2	318	October 21, 2021
Silva_132 16S database creation with RESCRIPt Community Plugin Support rescript	5	804	October 13, 2021
Using RESCRIPt to create an amplicon specific classifier with NCBI data Community Plugin Support feature-classifier , rescript	9	983	September 28, 2021
RESCRIPt full rrna operon RefSeq Community Plugin Support rescript	6	303	September 27, 2021
RESCRIPt question: Can you/should you dereplicate NCBI data? Community Plugin Support dereplicate , rescript	3	925	September 25, 2021
Is there a way to parallelize evaluate-fit-classifier? Community Plugin Support rescript	1	515	August 25, 2021
Help Needed Generating Database with RESCRIPt Community Plugin Support rescript	6	1185	August 23, 2021
Cutadapt not trimming 454 reads User Support 454 , cutadapt , rescript	8	871	September 4, 2021
Rescript merge-taxa non-urgent bug - blank taxon values created when using 'super' Community Plugin Support taxonomy , merge , rescript	2	466	July 8, 2021
rescript merge-taxa secondary selection criteria Community Plugin Support taxonomy , merge , rescript	3	638	July 6, 2021
Reference Alignments: Best Way to Download Many Sequences from NCBI GenBank General Discussion taxonomy , feature-table , rescript	13	3158	June 16, 2021
QIIME2 Error after Installing RESCRIPt Technical Support rescript	3	1326	July 3, 2021
Is rescript included with the latest version of QIIME2? Technical Support rescript	2	382	June 7, 2021
Check for duplicate id with entire line Developer Discussion import , rescript	3	951	April 22, 2021
Should I cluster my reference sequences to 97% for my classifier? Community Plugin Support feature-classifier , taxonomy , rescript	1	514	April 16, 2021
Testing feature classifier accuracy Community Plugin Support feature-classifier , rescript	7	1037	March 21, 2021
Using RESCRIPt to compile sequence databases and taxonomy classifiers from NCBI Genbank Tutorials taxonomy , rescript	7	11549	March 21, 2021
rescript error:TypeError: Default value for parameter 'reads_per_batch' is not of semantic QIIME type Int % Range(0, None) or `None`. Technical Support feature-classifier , taxonomy , rescript	3	536	April 9, 2021