Topics tagged permanova

Topic	Replies	Views	Activity
PERMANOVA and DESeq2: Re-evaluating Covariates After Subsetting by Time Point General Discussion permanova	1	63	June 9, 2025
Using output from QIIME2, I'm getting this error Error in model.frame.default(formula = dist_matrix ~ metadata$biome, drop.unused.levels = TRUE) : variable lengths differ (found for 'metadata$biome') Technical Support permanova	2	36	April 12, 2025
significant Permanova but non significant Permdisp General Discussion diversity , beta , permanova , permdisp	2	405	February 9, 2024
Difficulty interpreting the results of Permanova and Bray Curtis General Discussion permanova , pcoa	5	789	November 23, 2023
significative adonis test, but no significance in paired adonis test? General Discussion beta , permanova	3	1094	October 2, 2023
PERMANOVA and beta diversity analyses nested General Discussion permanova	2	394	September 28, 2023
can I run anosim for interactions (two factors)? General Discussion permanova	5	761	August 3, 2023
Using PERMANOVA in R to compare unbalanced groups with small sample size Other Bioinformatics Tools permanova , adonis	5	4851	May 27, 2023
PERMANOVA analysis interpretation User Support permanova	3	791	April 28, 2023
Does the skbio PERMANOVA function have a pairwise option like in qiime2? General Discussion permanova	2	664	February 14, 2023
PERMANOVA analysis in Jupyter notebook Other Bioinformatics Tools diversity , permanova	4	1029	March 10, 2023
how to take into account sample replicates in beta-group-significance testing? User Support permanova , adonis	5	937	February 15, 2023
PERMANOVA on small sample size? User Support permanova	3	1506	September 17, 2022
Does it make sense to explore differential abundant OTUs, when 2 groups are not significantly differente according to Permanova? General Discussion permanova	5	1176	September 24, 2021
What was the model used for the PERMANOVA (e.g. free permutations of residuals - n=5 does not allow for many permutations at the lowest level)? User Support permanova , pcoa	6	1251	September 10, 2021
Unbalanced sampling design and permanova User Support permanova	4	1007	September 7, 2021
Error in Beta Diversity - Pairwise sampling Technical Support beta , permanova	3	1055	July 13, 2021
Permanova analysis for distances General Discussion diversity , beta , permanova	9	2829	February 26, 2021
How to properly design formulas in Adonis ? User Support diversity , beta , permanova	4	3146	February 12, 2021
Plugin error from diversity QIIME 2020.8 PERMANOVA User Support permanova	2	782	November 15, 2020
comparing dissimilarity within and between groups (adonis-anosim-Kendall's W) General Discussion permanova , composition	0	1972	May 27, 2020
PERMANOVA- beta-group-significance User Support permanova	5	731	June 21, 2020
Understanding PERMANOVA QIIME2 Statistics for Beta Diversity General Discussion diversity , permanova	5	8641	April 16, 2020
Determining dispersion for beta diversity User Support core-metrics , permanova , permdisp	3	3000	January 6, 2020
PCoA and PERMANOVA results seem to contradict each other for beta diversity analysis User Support beta , permanova , pcoa	4	5164	September 14, 2019
ADONIS: correct interpretation of interaction among factors General Discussion permanova	2	6770	July 22, 2019
Adding more functions to PERMANOVA Ideas and Suggestions pending-development , permanova	5	4279	March 11, 2019
PCO trajectory to mean of replicates User Support core-metrics , permanova , longitudinal	3	700	January 7, 2019
Beta diversity significance values not as expected General Discussion beta , permanova	2	890	January 7, 2019
Beta group significance. High p-value in Permanova testing User Support permanova , unifrac	10	2354	December 3, 2018