Topics tagged mafft

Topic	Replies	Views	Activity
qiime alignment mafft error User Support mafft	3	36	June 15, 2025
MAFFT parameters - reproducability Technical Support mafft	4	84	February 22, 2025
MAFFT crashes after about 1 hour User Support mafft	5	210	January 5, 2024
plugin error from phylogeny - no such file or directory: mafft Technical Support mafft , phylogeny	5	707	June 10, 2023
Having trouble with alignment: mafft, SEPP, & SINA Technical Support import , align , mafft , sepp	10	1667	November 11, 2021
mafft does not work inside my Qiime2 environment Technical Support conda , mafft	7	1928	May 23, 2021
Re: Alignment error message Technical Support mafft	1	394	April 27, 2021
Info on qiime phylogeny align-to-tree-mafft-fasttree algorithm User Support mafft	2	1281	July 6, 2020
mafft --large argument support Ideas and Suggestions mafft	2	497	April 20, 2020
Question about 'masked' alignment- how do I acquire details of alignment? User Support mafft	3	1842	January 21, 2020
Aligning large numbers of reads User Support mafft	2	521	December 25, 2019
Mafft /dev/stderr permission denied under jupyter Technical Support mafft	11	1648	February 13, 2019
MAFFT Error: non-zero exit status 1 User Support mafft	11	4383	December 3, 2018
Problem running Mafft alignment User Support mafft	13	3433	November 2, 2018
Qiime alignment mafft threads error User Support pending-development , mafft	2	886	August 13, 2018
What Algorithm does Qiime use by Default for Multiple Sequence Alignment When Using MAFFT? User Support taxonomy , mafft	7	1235	July 1, 2018
Mafft error with virtual box User Support virtualbox , mafft	5	1443	June 28, 2018
Mafft error for alignment of rep-seqs User Support mafft	9	2548	June 1, 2018
Alignment error message User Support mafft	26	6178	May 11, 2018
Diversity plugin error User Support mafft	12	1606	March 22, 2018
Parameters in phylogenetic tree creation User Support mafft	2	1345	March 17, 2018
Alignment error message when input sequences over 1000000 User Support pending-development , mafft	8	1424	March 16, 2018
Error when trying to do multiple alignment User Support install , mafft	5	1322	February 10, 2018
MAFFT input in open-reference OTU picking workflow User Support mafft	3	703	January 4, 2018
Is mafft issue solved? User Support align , mafft , memory	11	3891	December 2, 2017
Alignment Problem User Support align , mafft	17	3933	October 27, 2017
Which alignment algorithm should I use User Support align , mafft , pynast , muscle , infernal	2	1052	September 14, 2017