|
Is it possible to have overlaping points in both Jaccard and Bray-Curtis but those points be spaced far apart in Unifrac
|
|
4
|
89
|
March 28, 2024
|
|
Full length 18S primers
|
|
1
|
111
|
March 22, 2024
|
|
multiple sequences assigned to same organism, copy number issue or best guess?
|
|
4
|
147
|
March 21, 2024
|
|
Annotation Challenges with COI Amplicon Analysis in QIIME2
|
|
3
|
169
|
March 20, 2024
|
|
Which quality control method should I choose?
|
|
7
|
158
|
March 15, 2024
|
|
Greengenes2 and q2-clawback
|
|
4
|
157
|
March 14, 2024
|
|
Dada2 Parameters choice
|
|
9
|
166
|
March 13, 2024
|
|
Quality control for shotgun metagenomics
|
|
4
|
191
|
March 14, 2024
|
|
How to unifying the alternative names for different taxonomy databases (e.g. Acidobacteriota vs. Acidobacteria in SILVA vs. GreenGenes)
|
|
3
|
168
|
March 12, 2024
|
|
unable to install Qiime2 on MacBook M1
|
|
7
|
801
|
March 8, 2024
|
|
Rarefaction: diversity or richness?
|
|
3
|
210
|
March 7, 2024
|
|
Combining high- and low-biomass samples in a run.
|
|
1
|
87
|
March 6, 2024
|
|
Import Novaseq data
|
|
4
|
168
|
March 5, 2024
|
|
Why is using rarefaction curves to help determine sampling depth prior to producing core diversity metrics not considered p-hacking/data-peeking?
|
|
2
|
134
|
March 5, 2024
|
|
How to perform Pathway enrichment analysis with mOTU output file?
|
|
0
|
70
|
February 28, 2024
|
|
q2-dada2 and NextSeq amplicon data
|
|
3
|
251
|
February 26, 2024
|
|
Which version of UNITE database should I choose?
|
|
2
|
1336
|
February 23, 2024
|
|
Understanding DADA2 parameters
|
|
1
|
175
|
March 20, 2024
|
|
Convert from Qiime2 database (2 files) to vsearch database (1 fasta file)
|
|
3
|
108
|
February 19, 2024
|
|
What is the decent amount and quality of reads for 16s sequencing?
|
|
3
|
119
|
February 19, 2024
|
|
combining metadata with demultiplexed sequence data
|
|
1
|
105
|
February 17, 2024
|
|
Installing Qiime2 on AWS EC2
|
|
1
|
104
|
February 16, 2024
|
|
How to create taxa barplot using SRA toolkit on Mac
|
|
2
|
126
|
February 16, 2024
|
|
Taxonomic Data: Using 18S-Nemabase in Qiime2 instead of Silva?
|
|
17
|
439
|
February 16, 2024
|
|
Shotgun metegenomics analysis on google colab
|
|
7
|
272
|
February 13, 2024
|
|
Research Question: New inoculum taxonomy doesn't match individual taxonomy
|
|
1
|
105
|
February 12, 2024
|
|
Network Analysis of Microbiome Data: MicrobiomeAnalyst vs. Cytoscape
|
|
0
|
229
|
February 5, 2024
|
|
significant Permanova but non significant Permdisp
|
|
2
|
174
|
February 9, 2024
|
|
NifH database for taxonomic assignment in qiime2
|
|
7
|
281
|
February 9, 2024
|
|
Methods Checklists for Microbiome Publication?
|
|
2
|
126
|
February 6, 2024
|
