I’m using SILVA for my analysis and I’m getting chloroplast reads which is to be expected from my sample.
But what I don’t get is why it falls under bacteria? I can see how cyanobacteria (phylum) falls under bacteria (domain). But I don’t get how chloroplast (class) falls under cyanobacteria? Is this an error in SILVA’s classification?
Bacteria; Cyanobacteria; Chloroplast;
I would think it should be:
Eukaryota; Plantae; Chloroplast;