SILVA 132 Classifiers 341f-806r region

I couldn’t find classifiers for this region, so I used code available here to train new ones, and thought I might as well share them for all to use.

Here is the new version for using primers:

f_primer = 'CCTACGGGNGGCWGCAG'
r_primer = 'GACTACHVGGGTATCTAATCC'

99 16S only

99 all

97 16S only

97 all

7 Likes

Thank you! Is this QIIME2-2019.7?

Best,
Justine

Yes, I couldn’t use the ones I had found as they had been made using the wrong version for scikit-learn.

1 Like

Awesome!

Thank you so much!

Worked very nicely. By any chance do you also have 97 version of this? I mean silva_132_97_v3v4_q2_2019-7
Thanks

1 Like

To be computed :smile:

2 Likes

Awesome, Thanks :slightly_smiling_face: