Processing, filtering, and evaluating the SILVA database (and other reference sequence data) with RESCRIPt

Community Contributions Tutorials

the_dummy June 26, 2020, 6:39am 2

This is just perfect. Thank you all!

2 Likes

how to train my classifier for V3-V4 16SRNA gene region

extracting amplicon region from alignment

Does QIIME2 support V1-V9 taxonomic classification?

LEfSe after QIIME2 to test at all taxonomic levels

Regarding Databases

Is unrestricted taxonomic assignment better for estimating numbers of genera?

RESCRIPt "super" dereplicate incorrect taxonomic behavior

rescript filter-taxa and dereplicate