I wanted to thank you for your tutorial (https://github.com/mestaki/qiime2-to-BugBase), since I’m trying to use Bugbase for some time.
Firstly I tried this summer following their Documentation, and unsuccessfully.
Today I’ve tried your tutorial to the letter, it generated all the files quickly and without problems but still when I upload them to the web app of Bugbase I get this message: There was an error while parsing your data. Please ensure your OTU and mapping files follow the format explained in the documentation. OTU tables must be the json version of biom.
I’m at my wits end.
I’m using qiime2-2019.4 version, macOS Mojave.
This is how my feature-table-tax-biom1.biom looks like in text editor:
This is how my metadata.txt looks like:
Any suggestion would be helpful…