Understanding DADA2 parameters


I am a QIIME2 user. Currently, I am making some educational content on microbiome analysis mainly focusing on QIIME2. I found it always confusing to choose DADA2 parameters. And there are a lot of questions in the qiime2 forum regarding this issue.

Based on my understanding, I have created the following two graphical representations which can be helpful in choosing DADA2 parameters. I am posting the images here, for verification of my understanding. There are a lot of experienced users here. Could you please have a look at these figures? Am I conceptually right? Do you have any suggestions?

I appreciate any suggestions you can provide.


This topic was automatically closed 31 days after the last reply. New replies are no longer allowed.