Split samples in different files

[thermokarst]

Hi there @tunski! Your command isn't formatted as a valid shell command. Please see this excellent note from @colinbrislawn:

Error phylogen (fasttree)

Hello Julissa, That screenshot is perfect. I think I have found the problem. It looks you have \ back slashes \ in your command. Take these out, the try running the command again. Colin P.S. I should explain that back slashes separate a command between multiple lines. Like this command --i file --o files --note "This works" command --i file \ --o files \ --note "This works, and it's on three lines" command --i file \ --o files \ --note "this does NOT work"