Hi Miseon, I found your post in hopes I could walk myself through using cutadapt. Unfortunately there is no discussion. 
It's been a couple years so this is no help to you Miseon, BUT if folks find themselves here then this post might be of help.
Hi Miseon, I found your post in hopes I could walk myself through using cutadapt. Unfortunately there is no discussion. It's been a couple years so this is no help to you Miseon, BUT if folks find themselves here then this post might be of help.