New taxonomy names in old classifier

Hi @alla_sky,

You can use RESCRIPt to curate your SILVA database, and use its edit-taxonomy action to edit the SILVA taxonomy file prior to training the classifier.

Otherwise, you can also use RESCRIPt's get-gtdb action to make your own GTDB database. Which uses many of these new naming conventions, though is not quite as expansive as SILVA.