LEfSe after QIIME2 to test at all taxonomic levels

Hello,

I have been told that the instructions at this link (Lefse after QIIME2) creates an input file suitable for testing differences at the genus level and that an input file created where each taxa has a sum is more suitable for testing at all taxonomic levels. Does anyone know how to create this second file in QIIME2?

Thank you,
Akriti

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