I am trying to export a .biom file to eventually convert to . tsv file to use LEfSe on (https://huttenhower.sph.harvard.edu/galaxy/). I am able to do this just fine, but I am unable to get a file with the one line of metadata I am interested in actually feeding this program to be included (in my case, the sex of the person that each sample came from).
How does one export a .biom file with metadata included from qiime2? I’ve tried to add the meta data to the .biom file with a .tsv file, but it never actually adds (referencing Exporting and modifying BIOM tables (e.g. adding taxonomy annotations)). Can anyone provide any help?