Hey man, I'm just here waiting for my fastq.gz to download. Ben
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I'm glad my suggestion helped!
And thanks for pointing out what my input files should be, because it was confusing.
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I (kind of) know the methods (or rather, the logic behind it) because metagenomic analysis was a part of my PhD thesis, though I worked on 16S libraries preparation rather than bioinformatics. I only mentioned some of the methods in the work and got the logic behind them but never got the chance to use them directly. Now I joined a new post-doc research project and I'm working on performing the analysis directly!
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