Add option to print all summary statistics of Dada2 plugin

Ideas and Suggestions
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#1

Hi

I know that the summary statistics of the Dada2 plugin are printed if you add --verbose to the command.
However, there is only the first 10? lines printed.
Would it be possible to add an option to save the table with all the samples in an output file as it’s very useful to account for quality check of the analysis, especially on 100 samples and more.
Best

Greg

2 Likes
#3

That’s a great idea @michoug! It looks like we have an issue tracking this, so I’ll add a cross-reference there, so that we know this was a requested feature (making the priority higher)!