Working with ITS data on a supercomputer/server

[ebolyen (Evan Bolyen)]

@ebolyen

That being said, for ITS, you’ll want to make sure that there are no reverse primers on your forward reads. We don’t have anything in QIIME 2 to help with that (yet).

QIIME 2 2017.12 has a new cutadapt plugin which provides trim-paired and trim-single which can be used to remove your reverse-primer on your forward reads!