Could anyone please let me know how to produce the taxonomy.qza file to be at genus taxonomy rank only not to species?, I'm not talking here about the feature table that can be collapsed to the interested taxonomy rank.
is there any command to perform this filtration with qiime2?
I'm grateful for your reply and suggestions,
from the tutorial of RESCRIPt;
''You can also choose the taxonomic ranks you'd like to backfill using the --p-rank-handles flag. Which we won't set here, as the default, e.g. :
`--p-rank-handles 'domain' 'phylum' 'class' 'order' 'family' 'genus' 'species''
This is what I'm looking for, so I'll follow this tutorial.