I tried my best to find a solution but couldn't.
I wish I could have a CSV file of taxonomy in percentages and not the number of hits (OTUs?).
I know in QIIME 1 we could have relative percentage of each phylum out of 100 but is there any feature like that available in QIIME2?
You have two options:
- Calculate per sample the ratio’s (add the row up, and then divide each value by that sum)
- taxa collapse && feature-table relative-abundance && export
Hope that helps!
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