R.4.0.3 compatibility with phyloseq and qiime2R

[Ricardo_Cruz (Ricardo Iván Cruz Cano)]

Hi! I´m new in this forum and I´d like to make a question about compatibility issues of R.4.0.3 with packages, “phyloseq” and “qiime2R”. Is there any other packages that replace those 2 for this recent version?

Greetings!

[jbisanz (Jordan Bisanz)]

Hi Ricardo,

Sorry to hear you having problems. I just checked and I was able to install both qiime2R and phyloseq into R 4.0.3. Could you share details of how you are trying to install the packages and any error messages you might be getting?

Jordan

[Ricardo_Cruz (Ricardo Iván Cruz Cano)]

Hi Jordan,
The message displayed by Rstudio says that “the package is not compatible with this version of R”. However, I managed to install qiime2R (with phyloseq included) via Github. The command with i used to do that was:

if (!requireNamespace(“devtools”, quietly= TRUE)){install.packages(“devtools”)}
devtools::install_github(“jbisanz/qiime2R”)

That allowed me to use the libraries.

Sorry for the inconvenient, and I appreciate the quick answer and help provided.

Ricardo