Question about filter

I want to analyze some samples in the library. So, I have filtered some samples that needed from table.qza of the library. then, I want to filter some samples from rep-seq.qza of the library, how can I do it ??help!

following is the command when I filtered some samples that needed from table.qza:

(qiime2-2017.12) [email protected]:~/LC$ qiime feature-table filter-samples \
> --i-table table-dada2-18S-6.qza \
> --m-metadata-file sample-metadata-18S-6.txt \
> --p-where "Subject='microorganisms in tissues'" \  
> --o-filtered-table subject-18S-6-filtered-table.qza

What exactly are you trying to do here? Your representative sequences are a list of features, not based on samples, so you can’t directly filter your representative sequences based on samples. Can you provide some more detail of what it is you are trying to accomplish by filtering your representative sequences? Thanks! :t_rex:

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