Hi,
I have generated a heatmap from the qiime2R package as shown here:
But how can I change the feature into "genera(phylum)" (eg: Pseudomonas(Proteobacteria)) instead of a long feature name (the whole taxon)?
Thanks!
But how can I change the feature into "genera(phylum)" (eg: Pseudomonas(Proteobacteria)) instead of a long feature name (the whole taxon)?
Hi @suetli19
you can try modify this line "mutate(Feature=gsub("[kpcofgs]__", "", Feature)) %>% " to "mutate(Feature=gsub("k__.*f__", "", Feature)) %>% "
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