Qiime2 Galaxy server

[Mantella86 (Martyn)]

Hi everyone, I see there is a QIIME2 galaxy server that is easy to use but I cannot find it. How do I get o this?

Kind regards

[lizgehret]

Hi @Mantella86,

Here is the public Galaxy server where you can utilize the QIIME 2 tool suite:
https://cancer.usegalaxy.org/

More details on using QIIME 2 through Galaxy can be found here, for your reference:

QIIME 2 available on public galaxy server!

I’m excited to share that QIIME 2 is now accessible through the public Galaxy server, https://cancer.usegalaxy.org! Galaxy is a web-based platform for accessible, reproducible, and scalable biomedical data analyses. This Galaxy server is generously hosted by and maintained by the Goecks Lab, a cancer data science research laboratory at Oregon Health & Science University. There are currently no restrictions on how the server can be used, but the Goecks Lab may need to limit storage and/or compute…

Cheers

[Mantella86 (Martyn)]

Hi Liz, thank you. I am trying it now. Do you know how to use the import tool. I have uploaded my fastq.GZ files one at a time in the upload box. What is the best way to get these into QIIME tools import?

I tried one file at a time and it came up with an error.

Kind regards

[Keegan-Evans]

@Mantella86,

I think you might find this tutorial helpful. It also includes links to videos from one of our workshops too!