Qiime2 compatible oceanic databases - PR2 and Phytoref

feature-classifier
(Du Niu) #1

Recently I was working on a project that requires tax assignment of oceanic samples using Bayesian classifier, but the main databases we used, PR2 and Phytoref, are not in the format compatible with Qiime2, so I just went ahead modified them and trained the classifier for Qiime2 use. If anyone also need to use these databases please feel free to download.

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(Jesse M) #2

This is great, thanks so much for sharing Niu! Can you tell me which version of PR2 and Phytoref you used to make the artifacts?

Thanks!
Jesse

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(Jesse M) #3

@Du_Niu just wanted to send a reminder with you tagged to see if you could put up the version info for posterity. Thanks again for sharing these artifacts!

Jesse

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