q2-itsxpress “Fatal error: File too small”

[thermokarst]

Please don't cross-post.

qiime itsxpress trim-single fatal error: file too small

If I look at files in the vsearch /tmp/itsxpress dir there are sequences for both .r1, and .r2 , but the command executed was for single-end reads: extract ITS2 seqs - this fails !qiime itsxpress trim-single --i-per-sample-sequences bastrop-sx2-outputs/sx2.demux.qza --p-region ITS2 --p-taxa F --o-trimmed bastrop-sx2-outputs/sx2.demux.ITS2.qza /tmp/itsxpress dir ls -l /tmp/itsxpress_fp0p5hbq/ total 6872 -rw-r--r-- 1 qiime2 qiime2 0 Mar 19 16:18 rep.fa -rw-r--r-- 1 qiime2 qiime…

Thanks!