Poll: Tell us about your amplicon sequencing data!

[jairideout (Jai Ram Rideout)]

Hi @Hilary_Morrison!

@Hilary_Morrison

We may also provide qc’d merged amplicon reads with these sequences removed, but the reads are now in fasta format. It would be great if the latter were importable into qiime. If this is already the case, please let me know…

If the demultiplexed and QC'd sequences in the FASTA file have sequence IDs that follow the QIIME 1 demux format, you can import the FASTA file and dereplicate the sequences and/or perform OTU picking using q2-vsearch. Check out the q2-vsearch Community Tutorial for details and example data.