1.Command:
qiime qemistree make-hierarchy --i-csi-results fingerprints.qza --i-feature-tables feature-table.qza --o-tree qemistree.qza --o-feature-table feature-table-hashed.qza --o-feature-data feature-data.qza
2.ERROR:
Plugin error from qemistree:
[Errno 2] No such file or directory: ‘/share/home/jianglab/yuanmengyi/tmp/qiime2-archive-8azccn3q/1afeb448-2c6d-40fe-8145-6a9438516848/data/csi-output’
Debug info has been saved to /share/home/jianglab/yuanmengyi/tmp/qiime2-q2cli-err-plp9ep2c.log
3.Debug info:
Traceback (most recent call last):
File “/share/home/jianglab/yuanmengyi/miniconda2/envs/qiime2-2021.2/lib/python3.6/site-packages/q2cli/commands.py”, line 329, in call
results = action(**arguments)
File “”, line 2, in make_hierarchy
File “/share/home/jianglab/yuanmengyi/miniconda2/envs/qiime2-2021.2/lib/python3.6/site-packages/qiime2/sdk/action.py”, line 245, in bound_callable
output_types, provenance)
File “/share/home/jianglab/yuanmengyi/miniconda2/envs/qiime2-2021.2/lib/python3.6/site-packages/qiime2/sdk/action.py”, line 390, in callable_executor
output_views = self._callable(**view_args)
File “/share/home/jianglab/yuanmengyi/miniconda2/envs/qiime2-2021.2/lib/python3.6/site-packages/q2_qemistree/_hierarchy.py”, line 126, in make_hierarchy
qc_properties, metric)
File “/share/home/jianglab/yuanmengyi/miniconda2/envs/qiime2-2021.2/lib/python3.6/site-packages/q2_qemistree/_process_fingerprint.py”, line 95, in process_csi_results
collated_fps = collate_fingerprint(csi_result, qc_properties, metric)
File “/share/home/jianglab/yuanmengyi/miniconda2/envs/qiime2-2021.2/lib/python3.6/site-packages/q2_qemistree/_process_fingerprint.py”, line 28, in collate_fingerprint
fpfoldrs = os.listdir(csi_result)
FileNotFoundError: [Errno 2] No such file or directory: ‘/share/home/jianglab/yuanmengyi/tmp/qiime2-archive-8azccn3q/1afeb448-2c6d-40fe-8145-6a9438516848/data/csi-output’
- qiime info:
System versions
Python version: 3.6.13
QIIME 2 release: 2021.2
QIIME 2 version: 2021.2.0
q2cli version: 2021.2.0
Installed plugins
alignment: 2021.2.0
composition: 2021.2.0
cutadapt: 2021.2.0
dada2: 2021.2.0
deblur: 2021.2.0
demux: 2021.2.0
diversity: 2021.2.0
diversity-lib: 2021.2.0
emperor: 2021.2.0
feature-classifier: 2021.2.0
feature-table: 2021.2.0
fragment-insertion: 2021.2.0
gneiss: 2021.2.0
longitudinal: 2021.2.0
metadata: 2021.2.0
phylogeny: 2021.2.0
qemistree: 2020.1.4
quality-control: 2021.2.0
quality-filter: 2021.2.0
sample-classifier: 2021.2.0
taxa: 2021.2.0
types: 2021.2.0
vsearch: 2021.2.0
Application config directory
/share/home/jianglab/yuanmengyi/miniconda2/envs/qiime2-2021.2/var/q2cli
Really and Sincerely need the help,Thanks very much.