few weeks ago I posted a topic asking how to import my sequences. Someone replied saying my sequences were “casava” and following this advice I successfully import my raw reads in QIIME.
Afterward, I realised that going through the pipeline there wasn’t a command to merge my forward and reverse reads.
Due to the fact I would prefer to analyse my combined reads rather than only the forwards, does anyone can suggest me a solution?
Here a subsample of my raw dataset: