Thank you for the help. I have a follow up question. From the links you provided, I learned that we can make a classifier using any of the gene from NCBI database. I would like to know if it is possible to use multiple genes (may be around 50-100 different genes) from NCBI to train ad use a classifier?
I have sequencing data from something like a multiplex PCR (with multiple primers targeting 50-100 different genes)and would like to assign taxonomy to the sequences. Would using multiple genes sequences from different species be a problem for taxonomy assignment?