Interaction terms using PERMANOVA for beta-diversity estimates?

Hi! I’d like to test an interaction term with

qiime diversity beta-diversity-significance

but don’t know how to do that. Could anyone give me some pointers? Thanks!

Hello @smreyes!

Do you mean qiime diversity beta-group-significance? If so, have you had a chance to look at the Moving Pictures Tutorial? The whole tutorial is worth spending some time on, but in particular, the Alpha & Beta Diversity Section of that tutorial spends a bit of time on running the diversity beta-group-significance command. I would suggest carving out some time to take a look at that, and if you still have any additional questions, well, you know where to find us! Good luck and keep us posted! :t_rex:

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