Hello Qiime2 Forum,
As a way to practice more with Qiime2 and the general command lines, I’ve been wanting to use publicly available data from the Integrative Human Microbiome Project (iHMP) website to perform some personal experiments.
This is the website that one can obtain data: https://portal.hmpdacc.org/
For anyone that has had experience with importing metadata from iHMP to Qiime2, how would you do it? I’m aware that you can download a manifest file too on iHMP. Every time I download either file option, the resulting Excel spreadsheet doesn’t have any of the genetic sequences for Qiime to recognize and perform statistical analyses.
Feel free to let me know what you recommend I do. Especially those that have worked with publicly available data, what are some resources and ways that I can apply those sets of data to Qiime? Thank you!