Hey @Scott_Kelley1 - are the data already demultiplexed (i.e., you have one R1 and one R2 file per sample)? If so, you could try out this little utility which generates fastq manifest files for importing demultiplexed data into QIIME 2.
Hey @Scott_Kelley1 - are the data already demultiplexed (i.e., you have one R1 and one R2 file per sample)? If so, you could try out this little utility which generates fastq manifest files for importing demultiplexed data into QIIME 2.