I am facing an error while installing, can you also guide me how to solve the issue;
install_bitbucket("brendo1001/dsmart")
Downloading bitbucket repo brendo1001/dsmart@HEAD
Skipping 1 packages ahead of CRAN: rgdal
√ checking for file 'C:\Users\Shahrokh\AppData\Local\Temp\Rtmp6ZLPxU\remotes1810262f7b50\brendo1001-dsmart-4d55ff9b1943/DESCRIPTION' (441ms)
preparing 'rdsmart': (5.8s)
checking DESCRIPTION meta-information ...It is recommended to use 'given' instead of 'middle'.
OK
excluding invalid files (959ms)
Subdirectory 'man' contains invalid file names:
'dsmart.txt'
It is recommended to use 'given' instead of 'middle'.
checking for LF line-endings in source and make files and shell scripts
checking for empty or unneeded directories
looking to see if a 'data/datalist' file should be added
building 'rdsmart_2.0.28.tar.gz' (866ms)
Installing package into ‘C:/Users/Shahrokh/Documents/R/win-library/4.0’
(as ‘lib’ is unspecified)
installing source package 'rdsmart' ...
** using staged installation
It is recommended to use 'given' instead of 'middle'.
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'rdsmart'
finding HTML links ... done
confusion_index html
dalrymple_composition html
dalrymple_covariates html
dalrymple_lookup html
dalrymple_observations html
dalrymple_polygons html
dalrymple_realisations html
disaggregate html
dot-allocate html
dot-blocks_per_node html
Rd warning: C:/Users/Shahrokh/AppData/Local/Temp/RtmpUNBsRP/R.INSTALL70c134c5ea8/rdsmart/man/dot-blocks_per_node.Rd:25: file link 'clusterR' in package 'raster' does not exist and so has been treated as a topic
Rd warning: C:/Users/Shahrokh/AppData/Local/Temp/RtmpUNBsRP/R.INSTALL70c134c5ea8/rdsmart/man/dot-blocks_per_node.Rd:32: file link 'beginCluster' in package 'raster' does not exist and so has been treated as a topic
dot-getStratifiedVirtualSamples html
dot-getVirtualSamples html
dsT_composition html
dsT_covariates html
dsT_lookup html
dsT_polygons html
dsmart html
dsmartOutMaps html
dsmartR html
obsLocs html
order_stack_values html
shannon_entropy html
sort_stack_values html
summarise html
** building package indices
** testing if installed package can be loaded from temporary location
*** arch - i386
Error: package or namespace load failed for 'rdsmart' in library.dynam(lib, package, package.lib):
DLL 'rgdal' not found: maybe not installed for this architecture?
Error: loading failed
Execution halted
*** arch - x64
ERROR: loading failed for 'i386'
removing 'C:/Users/Shahrokh/Documents/R/win-library/4.0/rdsmart'
Warning message:
In i.p(...) :
installation of package ‘C:/Users/Shahrokh/AppData/Local/Temp/Rtmp6ZLPxU/file18105c5663b9/rdsmart_2.0.28.tar.gz’ had non-zero exit status
library(rdsmart)
Error in library(rdsmart) : there is no package called ‘rdsmart’
Hi every one
I am facing an error while installing, can you also guide me how to solve the issue;
install_bitbucket(“brendo1001/dsmart”)
Downloading bitbucket repo brendo1001/dsmart@HEAD
Skipping 1 packages ahead of CRAN: rgdal
√ checking for file ‘C:\Users\Shahrokh\AppData\Local\Temp\Rtmp6ZLPxU\remotes1810262f7b50\brendo1001-dsmart-4d55ff9b1943/DESCRIPTION’ (441ms)
preparing ‘rdsmart’: (5.8s)
checking DESCRIPTION meta-information …It is recommended to use ‘given’ instead of ‘middle’.
OK
excluding invalid files (959ms)
Subdirectory ‘man’ contains invalid file names:
‘dsmart.txt’
It is recommended to use ‘given’ instead of ‘middle’.
checking for LF line-endings in source and make files and shell scripts
checking for empty or unneeded directories
looking to see if a ‘data/datalist’ file should be added
building ‘rdsmart_2.0.28.tar.gz’ (866ms)
Installing package into ‘C:/Users/Shahrokh/Documents/R/win-library/4.0’
(as ‘lib’ is unspecified)
installing source package ‘rdsmart’ …
** using staged installation
It is recommended to use ‘given’ instead of ‘middle’.
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘rdsmart’
finding HTML links … done
confusion_index html
dalrymple_composition html
dalrymple_covariates html
dalrymple_lookup html
dalrymple_observations html
dalrymple_polygons html
dalrymple_realisations html
disaggregate html
dot-allocate html
dot-blocks_per_node html
Rd warning: C:/Users/Shahrokh/AppData/Local/Temp/RtmpUNBsRP/R.INSTALL70c134c5ea8/rdsmart/man/dot-blocks_per_node.Rd:25: file link ‘clusterR’ in package ‘raster’ does not exist and so has been treated as a topic
Rd warning: C:/Users/Shahrokh/AppData/Local/Temp/RtmpUNBsRP/R.INSTALL70c134c5ea8/rdsmart/man/dot-blocks_per_node.Rd:32: file link ‘beginCluster’ in package ‘raster’ does not exist and so has been treated as a topic
dot-getStratifiedVirtualSamples html
dot-getVirtualSamples html
dsT_composition html
dsT_covariates html
dsT_lookup html
dsT_polygons html
dsmart html
dsmartOutMaps html
dsmartR html
obsLocs html
order_stack_values html
shannon_entropy html
sort_stack_values html
summarise html
** building package indices
** testing if installed package can be loaded from temporary location
*** arch - i386
Error: package or namespace load failed for ‘rdsmart’ in library.dynam(lib, package, package.lib):
DLL ‘rgdal’ not found: maybe not installed for this architecture?
Error: loading failed
Execution halted
*** arch - x64
ERROR: loading failed for ‘i386’
removing ‘C:/Users/Shahrokh/Documents/R/win-library/4.0/rdsmart’
Warning message:
In i.p(…) :
installation of package ‘C:/Users/Shahrokh/AppData/Local/Temp/Rtmp6ZLPxU/file18105c5663b9/rdsmart_2.0.28.tar.gz’ had non-zero exit status
library(rdsmart)
Error in library(rdsmart) : there is no package called ‘rdsmart’
Hi @Vaji36 - I have merged your two topics together, since they appear to be the same question. Please note, the dsmart packaged is not developed by the QIIME 2 development team, I think you’ll have better luck asking for help at their project page: https://bitbucket.org/brendo1001/dsmart/issues?status=new&status=open