Oops, sorry, I left off a key part of that statement!
$ qiime feature-table filter-features \
--i-table feature-table-filtered.qza \
--m-metadata-file taxonomy.qza \
--p-where "Taxon NOT LIKE '%Cyanobacteria%'" \
--o-filtered-table feature-table-filtered-without-Cyanobacteria.qza
Note the missing NOT
in the where
statement! Sorry about that, it was a copy-and-paste error.
This has been corrected above in the original snippet.