Hi everyone,
I have decided to use R for my own continence as my pipeline recently. However, I really couldn’t find a method to train a region-specific classifier (based on my primers) according to SILVA 138 database in R. However, back then I have already trained my own classifier based on my primer-set in QIIME2 through this tutorial, which its format is .qza, while the format which assignTaxonomy() function in R knows is a .gz as the input for the classifier library. Is there any way to convert my silva138-classifier-341f-805r.qza to silva138-classifier-341f-805r.gz?
Much appreciated in advance.