How can I find detailed documentation of qiime2's methods and functions in python?

Leytoncito · March 16, 2023, 5:56am

I've been trying to run dada2 in python, with the sources available in Qiime2. However I have not been able to extend the use of this API. I can't know the arguments of many available methods and functions, for example how I could specify the equivalent of "--p-n-threads" or "--p-min-fold-parent-over-abundance", among others from qiime2 Linux on quiime2 API.

Thanks in advace!

crusher083 · March 16, 2023, 9:19am

Hello,

please, read the docs on Artifact API. The corresponding API instructions are available in the tab next to the command line interface (CLI).

Cheers,
Valentyn

Leytoncito · March 17, 2023, 12:21am

Now everything makes sense

Thanks very mash

system · April 17, 2023, 6:22am

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