Help with LEfSE

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1

Dear All,

I am newby to Qiime2.

But I have a trouble with the LEfSE analysis. Briefly, i obtained the file in txt. I have tried to modified this file adding two raws in order to include Class- Subclass but when I switch to Galaxy there is this problem:

Traceback (most recent call last):
File “/shed_tools/testtoolshed.g2.bx.psu.edu/repos/george-weingart/lefse/a6284ef17bf3/lefse/format_input.py”, line 435, in
feats = numerical_values(feats,params[‘norm_v’])
File "/shed_tools/testtoolshed
31 A) Format Dat

I thought that y file was correctly formatted but I do not understand the problem or how to provide a correct txt.

Thanks a lot for your help

2

Hi @Well,

Welcome to our forum! Not to disuade you from asking for help here, but you may have more luck on the Galaxy forum for this particular problem. They are also very nice people :smiley:

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