Is it possible to filter a feature table to remove sequences with a length lower than a defined length
You can use RESCRIPt's filter-seqs-length-by-taxon, or filter-seqs-length. Then you can run the following command to filter the table to keep the sequences output from one of these commands (i.e. the
qiime feature-table filter-features \ --i-table ./table.qza \ --m-metadata-file ./sequences-to-keep.qza \ --o-filtered-table ./table-keep.qza
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