I'm using qiime2-2021.4 through conda, running on ubuntu 16.04.7 LTS. My system has 4 cores and 32GB of RAM.
I am trying to run the following command to visualize my delbur outputs .qza as a .qzv artifact :
qiime feature-table summarize --i-table deblur_output/table.qza --o-visualization deblur_output/deblur_table_summary.qzv
I have run this line successfully on a different dataset in qiime2-2020.2. This time however, it keeps running indefinitely and never outputs a .qzv file. Moreover, the command does not print any stacktrace/logs, even with the
--verbose option, making it difficult for me to diagnose what is going on. I am processing 309 samples.
I have had a look in the forum (e.g. here) and elsewhere online but haven't found a solution.
Any help would be much appreciated. Thanks in advance!