exporting demux.qza to seperate barcode.fastq files

Hi all
This is actually picking up on an old topic

I followed the link as supplied to the export page and couldnt find a single reference to “fastq”

I want to go from demux.qza to barcode1.fastq barcode2.fastq barcode2.fastq ect

I know it can be done but its been too long since I last used qiime so I’m a little rusty



Hi All
Turns out all I needed was my morning coffee!
Anyone following this post;

qiime tools export --input-path demultiplexed-seqs.qza --output-path ./

will do the trick and export as described above


This topic was automatically closed 31 days after the last reply. New replies are no longer allowed.