Error in qiime fragment-insertion sepp


(Lina Maria Martinez) #1

Dear all,

I just run the following command:
qiime fragment-insertion sepp \

–i-representative-sequences rep-seqs.qza
–o-tree insertion-tree.qza
–o-placements insertion-placements.qza

And I got the following error:

Plugin error from fragment-insertion:

Command ‘[‘run-sepp.sh’, ‘/home/ubuntu/linaqiimefiles/HealthyD/qiime2-archive-x43sce73/baad438c-4bca-4720-92b4-d43bb1ce65b6/data/dna-sequences.fasta’, ‘q2-fragment-insertion’, ‘-x’, ‘1’, ‘-A’, ‘1000’, ‘-P’, ‘5000’]’ returned non-zero exit status 1

Debug info has been saved to /home/ubuntu/linaqiimefiles/HealthyD/qiime2-q2cli-err-8oiauqwd.log

Could you tell what this error means, please? What can I do for making the command works? Thank you for all your suggestions


(Nicholas Bokulich) #2

An off-topic reply has been merged into an existing topic: Plugin error from fragment-insertion - CalledProcessError - run-sepp.sh - non-zero exit status 1

Please keep replies on-topic in the future.


(Nicholas Bokulich) #3