Error exporting and modifying biom


I have followed this tutorial but when I try to convert the table-with-taxonomy.biom to a tsv file I get an error message saying;

KeyError: "Unable to open object (object 'ids' doesn't exist)"

I searched on the biom format page for a solution to this but can't find any answers there.

edit: I updated biom with "conda install -c bioconda biom-format" and it work!

Thanks for your help.

1 Like

This topic was automatically closed 31 days after the last reply. New replies are no longer allowed.