Dear Qiime2 team,
when will you add the command for dual-barcoding demultiplexing? I think it will be very useful to many people since dual barcoding is used more often than just barcoding the forward reads. I really, really need it ASAP. Or is there some way around it?
Thank you.
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Hey there @Lucia_Zifcakova!
It is on our todo list, but no ETA on when it might be done.
There are other tools out there for doing this --- no need to let us hold you up. Did you do this work on an Illumina platform? If so, they have their own tools for demuxing DI PE data - you could do that there then import the demux reads into QIIME 2.
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