I wanted to know how to edit the command below, if no trimming is needed? I already have trimmed samples
qiime dada2 denoise-paired
Take a look at the docs for
You can set the
--p-trunc-len-r settings to the length of your reads, so nothing is trimmed.
I also want to direct you to the list of all first-party plugins for Qiime2.
You can check the documentation there, which I think is the best way to start answering most of your questions.
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