dada2 trim and trunq means


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Hi guys i want to know if i understand correct meaning.
my sequencing was single-end sequence with V3-V4 region
I want to trim and trunc dada2 file

Please help if this is correct code matched with meaning

  1. p-trim-left 296 --p-trunc-len 0
    -> eliminate nts under 295 and remain nts over 296 - 460

  2. p-trim-left 0 --p-trunc-len 296
    -> eliminate nts over 297 and remain nts over 0 - 296

is this right cod that i mean to?

Hi @medhanlee0721,

I am going to close out this thread since it is a duplicate from your post here. Please see our code of conduct regarding cross-posting. We are happy to continue providing guidance but please make sure to keep each issue/question to a single post; this helps us keep things organized. Thanks! :lizard:

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