dada2 fatal error wiht R

[shaojunyu (Shaojun)]

Plugin error from dada2:

An error was encountered while running DADA2 in R (return code -11), please inspect stdout and stderr to learn more.

Debug info has been saved to /tmp/qiime2-q2cli-err-g1qnuov3.log

Running external command line application(s). This may print messages to stdout and/or stderr.
The command(s) being run are below. These commands cannot be manually re-run as they will depend on temporary files that no longer exist.

Command: run_dada_paired.R /tmp/tmpebe6ohev/forward /tmp/tmpebe6ohev/reverse /tmp/tmpebe6ohev/output.tsv.biom /tmp/tmpebe6ohev/filt_f /tmp/tmpebe6ohev/filt_r 300 300 0 0 2.0 2 consensus 1.0 0 1000000

R version 3.4.1 (2017-06-30) 
Loading required package: Rcpp
DADA2 R package version: 1.6.0 
1) Filtering ................................
2) Learning Error Rates
2a) Forward Reads
Initializing error rates to maximum possible estimate.
Sample 1 - 34346 reads in 32495 unique sequences.

 *** caught segfault ***
address 0x8, cause 'memory not mapped'

[thermokarst]

We have just released a patched update to q2-dada2 that appears to fix this . Please follow the instructions here to get your hands on the patch, and please let us know how it goes! Thanks so much for all the support while we were debugging this!