best tools for genome assembly?

General Discussion
1

Hi

I'd like to get any recommendations for softwares/tools I could use for genome assembly (bacterial isolates, NOT metagenome) with Illumina and or PacBio data? I'm currently using patricbrc.org but I'd like to be aware of a few other recommended tools.

Thanks so much

2

How about this one? GitHub - rrwick/Unicycler: hybrid assembly pipeline for bacterial genomes

I've also used QUAST for assessing the quality of assemblies, which is a tool in the SPAdes assembler package.