What methods can you recommend I use to assess the accuracy of the classifier I made?

Hello Stephanie,

Because it's been a few days (and a few years for Sandy), I thought I would chime in.

These days, I think the recommended way is to evaluate accuracy and investigate database structure with the newest version of RESCRIPt.

If you want to try something totally different, consider this bootstrap method from Robert Edgar. I'm not sure how automated this method is.

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