Thanks for this nice tutorial! I am trying to run rescript (qiime2-amplicon-2024.5) with the most recent version of GTDB (trying '220.1'). Is it possible for update rescript only inside a particular qiime2 release ? If not, I will just start working with version gtdb version 214 and update later for using 220.
Welcome to the forum and thanks for using RESCRIPt! You can install the most recent version (development version) of RESCRIPt inside your qiime2-amplicon-2024.5 environment with this command:
pip install git+https://github.com/bokulich-lab/RESCRIPt.git
qiime dev refresh-cache