Hello,
I am currently trying to install q2studio using the tutorial found here: https://docs.qiime2.org/2020.11/interfaces/q2studio/
However, when I run the command “npm start” the resulting window is blank. I believe that the issue lies in the installation of q2studio and that there may be a problem with gevent as I am receiving an error about being unable to build wheel PEP 517. After searching the internet for a solution, I am unable to find one. I have updated python to 3.6.12 and am currently running that version. I have also updated pip and tried to install gevent both within and outside of the qiime 2 environments. I am able to reinstall it outside, but installing it inside results in another error about being unable to run PEP 517.
Thank you for your help.
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Have you searched for the problem on the forum? It is rare that we see a new question asked, so make sure you do your homework before asking for us to commit our time to helping you.
YES -
Have you reviewed the QIIME 2 Forum Glossary?
YES -
Version of QIIME 2 you are running, and how it is installed (e.g. Virtualbox, conda, etc.)
I am trying to run 2studio-2020.11.0. It is installed via conda. -
What is the exact command or commands you ran? Copy and paste please.
pip install .
npm install && npm run build
npm start
- What is the exact error message? If you didn’t run the command with the
--verboseflag, please re-run and copy-and-paste the results.
Processing /Users/kayce/q2studio-2020.11.0
Requirement already satisfied: click in /Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib/python3.6/site-packages (from q2studio==2020.11.0) (7.1.2)
Requirement already satisfied: flask in /Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib/python3.6/site-packages (from q2studio==2020.11.0) (1.1.2)
Requirement already satisfied: qiime2==2020.11.* in /Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib/python3.6/site-packages (from q2studio==2020.11.0) (2020.11.1)
Requirement already satisfied: Werkzeug>=0.15 in /Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib/python3.6/site-packages (from flask->q2studio==2020.11.0) (1.0.1)
Requirement already satisfied: Jinja2>=2.10.1 in /Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib/python3.6/site-packages (from flask->q2studio==2020.11.0) (2.11.2)
Requirement already satisfied: itsdangerous>=0.24 in /Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib/python3.6/site-packages (from flask->q2studio==2020.11.0) (1.1.0)
Requirement already satisfied: MarkupSafe>=0.23 in /Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib/python3.6/site-packages (from Jinja2>=2.10.1->flask->q2studio==2020.11.0) (1.1.1)
Collecting gevent
Using cached gevent-20.12.1.tar.gz (5.9 MB)
Installing build dependencies ... done
Getting requirements to build wheel ... done
Preparing wheel metadata ... done
Requirement already satisfied: setuptools in /Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib/python3.6/site-packages (from gevent->q2studio==2020.11.0) (51.1.1)
Collecting greenlet<2.0,>=0.4.17
Using cached greenlet-0.4.17-cp36-cp36m-macosx_10_9_x86_64.whl
Collecting zope.event
Using cached zope.event-4.5.0-py2.py3-none-any.whl (6.8 kB)
Collecting zope.interface
Using cached zope.interface-5.2.0-cp36-cp36m-macosx_10_6_intel.whl (204 kB)
Building wheels for collected packages: q2studio, gevent
Building wheel for q2studio (setup.py) ... done
Created wheel for q2studio: filename=q2studio-2020.11.0-py3-none-any.whl size=13549 sha256=50c07d77d9ad8e505b4c3ad5b0a3079ab01ec3d6e8bccf5afe247b3566edc2c9
Stored in directory: /Users/kayce/Library/Caches/pip/wheels/f9/83/b7/c8ebe28aa913e95cc4f865ae135593873ee1f02cedebcf615c
Building wheel for gevent (PEP 517) ... error
ERROR: Command errored out with exit status 1:
command: /Users/kayce/opt/miniconda2/envs/qiime2-2020.11/bin/python3.6 /Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib/python3.6/site-packages/pip/_vendor/pep517/_in_process.py build_wheel /var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/tmptg5jvreu
cwd: /private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-install-8irsk8qc/gevent_a4702d66912a4dc7bb9ae03a2a1414da
Complete output (398 lines):
running bdist_wheel
running build
running build_py
creating build
creating build/lib.macosx-10.9-x86_64-3.6
creating build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/queue.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_greenlet_primitives.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/greenlet.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/backdoor.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/time.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_semaphore.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/pywsgi.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_tracer.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_hub_local.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_imap.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/event.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/server.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/thread.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_util_py2.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/signal.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_monitor.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_ssl3.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/util.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/builtins.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/events.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/local.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/threadpool.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/subprocess.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_socketcommon.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/timeout.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/os.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/__init__.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_interfaces.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/selectors.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/core.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_ssl2.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/fileobject.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/contextvars.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_fileobjectcommon.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/hub.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_socket2.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/threading.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/win32util.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/resolver_ares.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/baseserver.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_waiter.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_hub_primitives.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_fileobjectposix.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_util.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/ares.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/lock.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_sslgte279.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_socket3.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/monkey.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_patcher.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_abstract_linkable.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/exceptions.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/select.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_compat.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_threading.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_config.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/ssl.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/socket.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/pool.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_ident.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/resolver_thread.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
copying src/gevent/_tblib.py -> build/lib.macosx-10.9-x86_64-3.6/gevent
creating build/lib.macosx-10.9-x86_64-3.6/gevent/libuv
copying src/gevent/libuv/_corecffi_build.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/libuv
copying src/gevent/libuv/__init__.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/libuv
copying src/gevent/libuv/loop.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/libuv
copying src/gevent/libuv/watcher.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/libuv
creating build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__issue639.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__socket_dns.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__core.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__issue330.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__issue112.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__socket.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__subprocess_poll.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__threading.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__core_async.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/_imports_at_top_level.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__select.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__iwait.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__socketpair.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__monkey_sigchld.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/lock_tests.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__core_stat.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__makefile_ref.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__ssl.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__issue1686.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__greenness.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__example_udp_client.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__examples.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__util.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__core_watcher.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__monkey_module_run.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__example_wsgiserver_ssl.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__ares_timeout.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__socket_dns6.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test___ident.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__threading_vs_settrace.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__issue230.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__timeout.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__close_backend_fd.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__sleep0.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__monkey_hub_in_thread.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__monkey_futures_thread.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__threading_no_monkey.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__os.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__threading_patched_local.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__all__.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__issue607.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__hub_join.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test___monkey_patching.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__import_wait.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__socket_send_memoryview.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__server_pywsgi.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__fileobject.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__monkey_builtins_future.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__monkey_select.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/_blocks_at_top_level.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__import_blocking_in_greenlet.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__core_callback.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__issue_728.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__monkey_sigchld_2.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__threading_monkey_in_thread.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__example_udp_server.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/__init__.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__destroy.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__threadpool.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__monkey_sigchld_3.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__monkey.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/known_failures.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/_imports_imports_at_top_level.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__subprocess.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__threading_before_monkey.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__api.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__hub_join_timeout.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__monkey_multiple_imports.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__joinall.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__monkey_logging.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__nondefaultloop.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__core_loop_run.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__example_wsgiserver.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__greenletset.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__backdoor.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__GreenletExit.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__refcount.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__refcount_core.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__hub.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__doctests.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__greenlet.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test___config.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__resolver_dnspython.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/_import_wait.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__destroy_default_loop.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__core_timer.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__issues461_471.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__issue6.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__events.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__greenio.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__environ.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__getaddrinfo_import.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__example_webproxy.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__threading_native_before_monkey.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__local.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__api_timeout.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__issue467.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__threading_holding_lock_while_monkey.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__monkey_selectors.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__socket_close.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__pool.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__order.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test___monitor.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__issue600.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__memleak.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__execmodules.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__contextvars.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__example_portforwarder.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__systemerror.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__exc_info.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__socket_ex.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__socket_errors.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__lock.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__server.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__socket_timeout.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__pywsgi.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__semaphore.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__core_fork.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__monkey_ssl_warning3.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__loop_callback.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/getaddrinfo_module.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__threadpool_executor_patched.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__subprocess_interrupted.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__real_greenlet.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__selectors.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__ares_host_result.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__monkey_ssl_warning2.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__example_echoserver.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/_import_import_patch.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/__main__.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__queue.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__socket_ssl.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__monkey_ssl_warning.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__threading_2.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__event.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__signal.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/_import_patch.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__compat.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__monkey_queue.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test__thread.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
creating build/lib.macosx-10.9-x86_64-3.6/gevent/_ffi
copying src/gevent/_ffi/callback.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/_ffi
copying src/gevent/_ffi/__init__.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/_ffi
copying src/gevent/_ffi/loop.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/_ffi
copying src/gevent/_ffi/watcher.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/_ffi
creating build/lib.macosx-10.9-x86_64-3.6/gevent/testing
copying src/gevent/testing/skipping.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/testing
copying src/gevent/testing/patched_tests_setup.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/testing
copying src/gevent/testing/exception.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/testing
copying src/gevent/testing/params.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/testing
copying src/gevent/testing/leakcheck.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/testing
copying src/gevent/testing/travis.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/testing
copying src/gevent/testing/support.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/testing
copying src/gevent/testing/testcase.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/testing
copying src/gevent/testing/util.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/testing
copying src/gevent/testing/monkey_test.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/testing
copying src/gevent/testing/switching.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/testing
copying src/gevent/testing/__init__.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/testing
copying src/gevent/testing/hub.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/testing
copying src/gevent/testing/timing.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/testing
copying src/gevent/testing/six.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/testing
copying src/gevent/testing/sysinfo.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/testing
copying src/gevent/testing/resources.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/testing
copying src/gevent/testing/sockets.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/testing
copying src/gevent/testing/modules.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/testing
copying src/gevent/testing/openfiles.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/testing
copying src/gevent/testing/errorhandler.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/testing
copying src/gevent/testing/testrunner.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/testing
copying src/gevent/testing/flaky.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/testing
creating build/lib.macosx-10.9-x86_64-3.6/gevent/libev
copying src/gevent/libev/_corecffi_build.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/libev
copying src/gevent/libev/__init__.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/libev
copying src/gevent/libev/corecffi.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/libev
copying src/gevent/libev/watcher.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/libev
creating build/lib.macosx-10.9-x86_64-3.6/gevent/resolver
copying src/gevent/resolver/thread.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/resolver
copying src/gevent/resolver/dnspython.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/resolver
copying src/gevent/resolver/__init__.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/resolver
copying src/gevent/resolver/_addresses.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/resolver
copying src/gevent/resolver/ares.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/resolver
copying src/gevent/resolver/blocking.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/resolver
copying src/gevent/resolver/_hostsfile.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/resolver
creating build/lib.macosx-10.9-x86_64-3.6/gevent/tests/monkey_package
copying src/gevent/tests/monkey_package/threadpool_no_monkey.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests/monkey_package
copying src/gevent/tests/monkey_package/__init__.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests/monkey_package
copying src/gevent/tests/monkey_package/issue1526_with_monkey.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests/monkey_package
copying src/gevent/tests/monkey_package/issue1526_no_monkey.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests/monkey_package
copying src/gevent/tests/monkey_package/threadpool_monkey_patches.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests/monkey_package
copying src/gevent/tests/monkey_package/issue302monkey.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests/monkey_package
copying src/gevent/tests/monkey_package/script.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests/monkey_package
copying src/gevent/tests/monkey_package/__main__.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests/monkey_package
copying src/gevent/tests/sha256.pem -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/nullcert.pem -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/https_svn_python_org_root.pem -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/wrongcert.pem -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/keycert.pem -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/2_7_keycert.pem -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/badkey.pem -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/badcert.pem -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/server.crt -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test_server.crt -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/tests_that_dont_monkeypatch.txt -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/tests_that_dont_do_leakchecks.txt -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/hosts_file.txt -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/tests_that_dont_use_resolver.txt -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/test_server.key -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
copying src/gevent/tests/server.key -> build/lib.macosx-10.9-x86_64-3.6/gevent/tests
creating build/lib.macosx-10.9-x86_64-3.6/gevent/testing/coveragesite
copying src/gevent/testing/coveragesite/sitecustomize.py -> build/lib.macosx-10.9-x86_64-3.6/gevent/testing/coveragesite
running build_ext
generating cffi module 'build/temp.macosx-10.9-x86_64-3.6/gevent.libuv._corecffi.c'
creating build/temp.macosx-10.9-x86_64-3.6
Running '(cd "/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-install-8irsk8qc/gevent_a4702d66912a4dc7bb9ae03a2a1414da/deps/libev" && sh ./configure -C > configure-output.txt )' in /private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-install-8irsk8qc/gevent_a4702d66912a4dc7bb9ae03a2a1414da
generating cffi module 'build/temp.macosx-10.9-x86_64-3.6/gevent.libev._corecffi.c'
Not configuring libev, 'config.h' already exists
Not configuring libev, 'config.h' already exists
building 'gevent.libev.corecext' extension
creating build/temp.macosx-10.9-x86_64-3.6/src
creating build/temp.macosx-10.9-x86_64-3.6/src/gevent
creating build/temp.macosx-10.9-x86_64-3.6/src/gevent/libev
x86_64-apple-darwin13.4.0-clang -DNDEBUG -fwrapv -O2 -Wall -Wstrict-prototypes -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -isystem /Users/kayce/opt/miniconda2/envs/qiime2-2020.11/include -D_FORTIFY_SOURCE=2 -isystem /Users/kayce/opt/miniconda2/envs/qiime2-2020.11/include -DLIBEV_EMBED=1 -DEV_COMMON= -DEV_CLEANUP_ENABLE=0 -DEV_EMBED_ENABLE=0 -DEV_PERIODIC_ENABLE=0 -DEV_USE_REALTIME=1 -DEV_USE_MONOTONIC=1 -DEV_USE_FLOOR=1 -Isrc/gevent/libev -I/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/include/python3.6m -I/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-install-8irsk8qc/gevent_a4702d66912a4dc7bb9ae03a2a1414da/deps -I/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-install-8irsk8qc/gevent_a4702d66912a4dc7bb9ae03a2a1414da/src/gevent/libev -I/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-install-8irsk8qc/gevent_a4702d66912a4dc7bb9ae03a2a1414da/deps/libev -Isrc/gevent -Isrc/gevent/libev -Isrc/gevent/resolver -I. -I/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/include/python3.6m -c src/gevent/libev/corecext.c -o build/temp.macosx-10.9-x86_64-3.6/src/gevent/libev/corecext.o -Wno-unreachable-code -Wno-deprecated-declarations -Wno-incompatible-sysroot -Wno-tautological-compare -Wno-implicit-function-declaration -Wno-unused-value -Wno-macro-redefined
x86_64-apple-darwin13.4.0-clang -DNDEBUG -fwrapv -O2 -Wall -Wstrict-prototypes -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -isystem /Users/kayce/opt/miniconda2/envs/qiime2-2020.11/include -D_FORTIFY_SOURCE=2 -isystem /Users/kayce/opt/miniconda2/envs/qiime2-2020.11/include -DLIBEV_EMBED=1 -DEV_COMMON= -DEV_CLEANUP_ENABLE=0 -DEV_EMBED_ENABLE=0 -DEV_PERIODIC_ENABLE=0 -DEV_USE_REALTIME=1 -DEV_USE_MONOTONIC=1 -DEV_USE_FLOOR=1 -Isrc/gevent/libev -I/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/include/python3.6m -I/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-install-8irsk8qc/gevent_a4702d66912a4dc7bb9ae03a2a1414da/deps -I/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-install-8irsk8qc/gevent_a4702d66912a4dc7bb9ae03a2a1414da/src/gevent/libev -I/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-install-8irsk8qc/gevent_a4702d66912a4dc7bb9ae03a2a1414da/deps/libev -Isrc/gevent -Isrc/gevent/libev -Isrc/gevent/resolver -I. -I/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/include/python3.6m -c src/gevent/libev/callbacks.c -o build/temp.macosx-10.9-x86_64-3.6/src/gevent/libev/callbacks.o -Wno-unreachable-code -Wno-deprecated-declarations -Wno-incompatible-sysroot -Wno-tautological-compare -Wno-implicit-function-declaration -Wno-unused-value -Wno-macro-redefined
x86_64-apple-darwin13.4.0-clang -bundle -undefined dynamic_lookup -Wl,-pie -Wl,-headerpad_max_install_names -Wl,-rpath,/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib -L/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib -Wl,-pie -Wl,-headerpad_max_install_names -Wl,-rpath,/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib -L/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib -Wl,-export_dynamic -Wl,-pie -Wl,-headerpad_max_install_names -Wl,-dead_strip_dylibs -Wl,-rpath,/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib -L/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -isystem /Users/kayce/opt/miniconda2/envs/qiime2-2020.11/include -D_FORTIFY_SOURCE=2 -isystem /Users/kayce/opt/miniconda2/envs/qiime2-2020.11/include -arch x86_64 build/temp.macosx-10.9-x86_64-3.6/src/gevent/libev/corecext.o build/temp.macosx-10.9-x86_64-3.6/src/gevent/libev/callbacks.o -o build/lib.macosx-10.9-x86_64-3.6/gevent/libev/corecext.cpython-36m-darwin.so
ld: warning: -pie being ignored. It is only used when linking a main executable
Embedding c-ares <cffi.setuptools_ext._add_c_module.<locals>.build_ext_make_mod object at 0x7ffab49a62e8> <_setuputils.Extension('gevent.resolver.cares') at 0x7ffab428f470>
Inserted build/temp.macosx-10.9-x86_64-3.6/c-ares in include dirs ['build/temp.macosx-10.9-x86_64-3.6/c-ares', '/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/include/python3.6m', '/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/include/python3.6m', '/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-install-8irsk8qc/gevent_a4702d66912a4dc7bb9ae03a2a1414da/deps', '/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-install-8irsk8qc/gevent_a4702d66912a4dc7bb9ae03a2a1414da/deps/c-ares', 'src/gevent', 'src/gevent/libev', 'src/gevent/resolver', '.']
Running '(cd "/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-install-8irsk8qc/gevent_a4702d66912a4dc7bb9ae03a2a1414da/deps/c-ares" && if [ -r ares_build.h ]; then cp ares_build.h ares_build.h.orig; fi && sh ./configure --disable-dependency-tracking -C CFLAGS="-Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -fwrapv -O2 -Wall -Wstrict-prototypes -isysroot /opt/MacOSX10.9.sdk -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -isysroot /opt/MacOSX10.9.sdk -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -isystem /Users/kayce/opt/miniconda2/envs/qiime2-2020.11/include" && cp ares_config.h ares_build.h "$OLDPWD" && cat ares_build.h && if [ -r ares_build.h.orig ]; then mv ares_build.h.orig ares_build.h; fi) > configure-output.txt' in /private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-install-8irsk8qc/gevent_a4702d66912a4dc7bb9ae03a2a1414da/build/temp.macosx-10.9-x86_64-3.6/c-ares
configure: WARNING: Continuing even with errors mentioned immediately above this line.
configure: error: in `/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-install-8irsk8qc/gevent_a4702d66912a4dc7bb9ae03a2a1414da/deps/c-ares':
configure: error: cannot run C compiled programs.
If you meant to cross compile, use `--host'.
See `config.log' for more details
configure: creating cache config.cache
checking whether to enable maintainer-specific portions of Makefiles... no
checking whether make supports nested variables... yes
checking whether to enable debug build options... no
checking whether to enable compiler optimizer... not specified (assuming yes)
checking whether to enable strict compiler warnings... no
checking whether to enable compiler warnings as errors... no
checking whether to enable curl debug memory tracking... no
checking whether to enable hiding of library internal symbols... yes
checking whether to expose internal static functions for testing... no
checking for path separator... :
checking for sed... /usr/bin/sed
checking for grep... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for a sed that does not truncate output... (cached) /usr/bin/sed
checking whether to build with code coverage support... no
checking build system type... x86_64-apple-darwin13.4.0
checking host system type... x86_64-apple-darwin13.4.0
configure: using CFLAGS: -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -fwrapv -O2 -Wall -Wstrict-prototypes -isysroot /opt/MacOSX10.9.sdk -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -isysroot /opt/MacOSX10.9.sdk -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -isystem /Users/kayce/opt/miniconda2/envs/qiime2-2020.11/include
configure: CFLAGS error: CFLAGS may only be used to specify C compiler flags, not macro definitions. Use CPPFLAGS for: -DNDEBUG
checking for a BSD-compatible install... /usr/bin/install -c
checking for x86_64-apple-darwin13.4.0-gcc... x86_64-apple-darwin13.4.0-clang
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling...
Traceback (most recent call last):
File "/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib/python3.6/site-packages/pip/_vendor/pep517/_in_process.py", line 280, in <module>
main()
File "/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib/python3.6/site-packages/pip/_vendor/pep517/_in_process.py", line 263, in main
json_out['return_val'] = hook(**hook_input['kwargs'])
File "/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib/python3.6/site-packages/pip/_vendor/pep517/_in_process.py", line 205, in build_wheel
metadata_directory)
File "/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-build-env-eoit4eov/overlay/lib/python3.6/site-packages/setuptools/build_meta.py", line 217, in build_wheel
wheel_directory, config_settings)
File "/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-build-env-eoit4eov/overlay/lib/python3.6/site-packages/setuptools/build_meta.py", line 202, in _build_with_temp_dir
self.run_setup()
File "/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-build-env-eoit4eov/overlay/lib/python3.6/site-packages/setuptools/build_meta.py", line 254, in run_setup
self).run_setup(setup_script=setup_script)
File "/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-build-env-eoit4eov/overlay/lib/python3.6/site-packages/setuptools/build_meta.py", line 145, in run_setup
exec(compile(code, __file__, 'exec'), locals())
File "setup.py", line 478, in <module>
run_setup(EXT_MODULES)
File "setup.py", line 462, in run_setup
"signal_os_incompat = gevent.monkey:_subscribe_signal_os",
File "/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-build-env-eoit4eov/overlay/lib/python3.6/site-packages/setuptools/__init__.py", line 153, in setup
return distutils.core.setup(**attrs)
File "/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib/python3.6/distutils/core.py", line 148, in setup
dist.run_commands()
File "/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib/python3.6/distutils/dist.py", line 955, in run_commands
self.run_command(cmd)
File "/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib/python3.6/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-build-env-eoit4eov/overlay/lib/python3.6/site-packages/wheel/bdist_wheel.py", line 299, in run
self.run_command('build')
File "/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib/python3.6/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib/python3.6/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib/python3.6/distutils/command/build.py", line 135, in run
self.run_command(cmd_name)
File "/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib/python3.6/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib/python3.6/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-build-env-eoit4eov/overlay/lib/python3.6/site-packages/cffi/setuptools_ext.py", line 144, in run
base_class.run(self)
File "/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-build-env-eoit4eov/overlay/lib/python3.6/site-packages/cffi/setuptools_ext.py", line 144, in run
base_class.run(self)
File "/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-build-env-eoit4eov/overlay/lib/python3.6/site-packages/setuptools/command/build_ext.py", line 79, in run
_build_ext.run(self)
File "/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-build-env-eoit4eov/overlay/lib/python3.6/site-packages/Cython/Distutils/old_build_ext.py", line 187, in run
_build_ext.build_ext.run(self)
File "/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib/python3.6/distutils/command/build_ext.py", line 339, in run
self.build_extensions()
File "/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib/python3.6/distutils/command/build_ext.py", line 448, in build_extensions
self._build_extensions_serial()
File "/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib/python3.6/distutils/command/build_ext.py", line 473, in _build_extensions_serial
self.build_extension(ext)
File "/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-install-8irsk8qc/gevent_a4702d66912a4dc7bb9ae03a2a1414da/_setuputils.py", line 351, in build_extension
self.gevent_prepare(ext)
File "/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-install-8irsk8qc/gevent_a4702d66912a4dc7bb9ae03a2a1414da/_setuputils.py", line 348, in gevent_prepare
configure(self, ext)
File "/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-install-8irsk8qc/gevent_a4702d66912a4dc7bb9ae03a2a1414da/_setupares.py", line 80, in configure_ares
system(ares_configure_command)
File "/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-install-8irsk8qc/gevent_a4702d66912a4dc7bb9ae03a2a1414da/_setuputils.py", line 195, in system
if _system(cmd, cwd=cwd, env=env, **kwargs):
File "/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-install-8irsk8qc/gevent_a4702d66912a4dc7bb9ae03a2a1414da/_setuputils.py", line 191, in _system
return check_call(cmd, cwd=cwd, env=env, **kwargs)
File "/Users/kayce/opt/miniconda2/envs/qiime2-2020.11/lib/python3.6/subprocess.py", line 311, in check_call
raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '(cd "/private/var/folders/fy/1wvg0cpx4nq3j4ppz5nb0yk80000gn/T/pip-install-8irsk8qc/gevent_a4702d66912a4dc7bb9ae03a2a1414da/deps/c-ares" && if [ -r ares_build.h ]; then cp ares_build.h ares_build.h.orig; fi && sh ./configure --disable-dependency-tracking -C CFLAGS="-Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -fwrapv -O2 -Wall -Wstrict-prototypes -isysroot /opt/MacOSX10.9.sdk -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -isysroot /opt/MacOSX10.9.sdk -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -march=core2 -mtune=haswell -mssse3 -ftree-vectorize -fPIC -fPIE -fstack-protector-strong -O2 -pipe -isystem /Users/kayce/opt/miniconda2/envs/qiime2-2020.11/include" && cp ares_config.h ares_build.h "$OLDPWD" && cat ares_build.h && if [ -r ares_build.h.orig ]; then mv ares_build.h.orig ares_build.h; fi) > configure-output.txt' returned non-zero exit status 1.
----------------------------------------
ERROR: Failed building wheel for gevent
Successfully built q2studio
Failed to build gevent
ERROR: Could not build wheels for gevent which use PEP 517 and cannot be installed directly
npm WARN [email protected] requires a peer of @types/react@^16.3.18 but none is installed. You must install peer dependencies yourself.
npm WARN [email protected] requires a peer of react@^16.3.0 but none is installed. You must install peer dependencies yourself.
npm WARN [email protected] requires a peer of @types/react@^16.3.18 but none is installed. You must install peer dependencies yourself.
npm WARN [email protected] requires a peer of react@^16.3.0 but none is installed. You must install peer dependencies yourself.
up to date in 14.369s
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run `npm fund` for details
> [email protected] build /Users/kayce/q2studio-2020.11.0
> npm run build:main && npm run build:render
> [email protected] build:main /Users/kayce/q2studio-2020.11.0
> webpack --config config/webpack.main.config.js
Hash: 3780df97657ba01ec45f
Version: webpack 1.15.0
Time: 2419ms
Asset Size Chunks Chunk Names
main.js 50.8 kB 0 [emitted] main
[0] multi main 28 bytes {0} [built]
+ 153 hidden modules
> [email protected] build:render /Users/kayce/q2studio-2020.11.0
> webpack --config config/webpack.prod.config.js
Hash: bcbb317670222cac8704
Version: webpack 1.15.0
Time: 14762ms
Asset Size Chunks Chunk Names
js/bundle.js 2.25 MB 0 [emitted] main
css/main.css 2.09 kB 0 [emitted] main
index.html 613 bytes [emitted]
[0] multi main 28 bytes {0} [built]
+ 1166 hidden modules
Child html-webpack-plugin for "index.html":
+ 3 hidden modules
Child extract-text-webpack-plugin:
+ 2 hidden modules
Child extract-text-webpack-plugin:
+ 2 hidden modules
Child extract-text-webpack-plugin:
+ 2 hidden modules
